SAMEA5770265

EXTERNAL

Sample

Accession

SAMEA5770265

Alias

R44

Sex

Male

Center

STANFORD SCHOOL OF MEDICINE

Description

DNA extracted from the petrous bone of an individual (sample R44) buried in Isola Sacra, Italy and dated to 1-400CE (Imperial). The sample was whole genome sequenced to 1.03x. 62.8% of DNA extracted from the sample was human (mapped to hg19).

Source publications

Ancient Rome: A genetic crossroads of Europe and the Mediterranean (2019)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway T2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R2'JT
JT
chrM:10674A>G, chrM:14875C>A, chrM:15549T>C, chrM:3639T>C
T
chrM:12791G>A, chrM:1312G>A, chrM:133G>A, chrM:14328G>A, chrM:15030A>G, chrM:15351G>A, chrM:15717C>T, chrM:4340A>G, chrM:8120G>A, chrM:9886T>C
T2
chrM:11235A>G, chrM:13656A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: unspecified · Layout: SINGLE · Reads: 63152503 · Read length: — · Date: 2019-11-05

File	Format	Size	Reference	Aligner	md5
R44.bam	BAM	3.4 GB	—	—	abf306cfd9a6690c71229e6a1bef73c4	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.