SAMEA5770247

EXTERNAL

Sample

Accession

SAMEA5770247

Alias

R67

Sex

Female

Center

STANFORD SCHOOL OF MEDICINE

Description

DNA extracted from the petrous bone of an individual (sample R67) buried in ANAS (Azienda Nazionale Autonoma delle Strada), Italy and dated to 100-300CE (Imperial). The sample was whole genome sequenced to 1.64x. 67.7% of DNA extracted from the sample was human (mapped to hg19).

Source publications

Ancient Rome: A genetic crossroads of Europe and the Mediterranean (2019)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway T2c1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R2'JT
JT
chrM:10674A>G, chrM:14875C>A, chrM:15549T>C, chrM:3639T>C
T
chrM:12791G>A, chrM:1312G>A, chrM:133G>A, chrM:14328G>A, chrM:15030A>G, chrM:15351G>A, chrM:15717C>T, chrM:4340A>G, chrM:8120G>A, chrM:9886T>C
T2
chrM:11235A>G, chrM:13656A>G
T2c1
chrM:10245C>T, chrM:15715C>T, chrM:5684G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: unspecified · Layout: SINGLE · Reads: 93171965 · Read length: — · Date: 2019-11-05

File	Format	Size	Reference	Aligner	md5
R67.bam	BAM	5.7 GB	—	—	dab9104cfd41cd1115c20a7c93af12eb	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.