SAMEA5770225

EXTERNAL

Sample

Accession

SAMEA5770225

Alias

R80

Sex

Female

Center

STANFORD SCHOOL OF MEDICINE

Description

DNA extracted from the petrous bone of an individual (sample R80) buried in Viale Rossini (Necropoli Salaria), Italy and dated to 23-130calCE (Imperial). The sample was whole genome sequenced to 1.9x. 60.6% of DNA extracted from the sample was human (mapped to hg19).

Source publications

Ancient Rome: A genetic crossroads of Europe and the Mediterranean (2019)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U6a5

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U6a'b'd
chrM:15595T>C, chrM:15642A>G, chrM:2771A>G
U6a
chrM:13602A>G, chrM:15701C>T, chrM:7228G>A
U6a5
chrM:13013G>A, chrM:15350G>A, chrM:15942C>T, chrM:3014G>A, chrM:7065G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: unspecified · Layout: SINGLE · Reads: 109852459 · Read length: — · Date: 2019-11-05

File	Format	Size	Reference	Aligner	md5
R80.bam	BAM	5.4 GB	—	—	299d7db3765e546ca89f2d6d947a3b56	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.