SAMEA5770213

EXTERNAL

Sample

Accession

SAMEA5770213

Alias

Sex

Female

Center

STANFORD SCHOOL OF MEDICINE

Description

DNA extracted from the petrous bone of an individual (sample R1) buried in Martinsicuro, Italy and dated to 930-839calBCE (Iron/Republic). The sample was whole genome sequenced to 3.94x. 73.3% of DNA extracted from the sample was human (mapped to hg19).

Source publications

Ancient Rome: A genetic crossroads of Europe and the Mediterranean (2019)

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway F1g

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R9
chrM:13351G>C, chrM:3393C>T
F
chrM:5815T>C, chrM:9733G>A
F1
chrM:10032T>C, chrM:11829G>A, chrM:6385G>A
F1g
chrM:1813C>T, chrM:2821T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: unspecified · Layout: SINGLE · Reads: 213512259 · Read length: — · Date: 2019-11-05

File	Format	Size	Reference	Aligner	md5
R1.bam	BAM	9.7 GB	—	—	dcd1c48ec917ac56eaebbddaecaad7c2	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.