SAMEA5743576

EXTERNAL

Sample

Accession

SAMEA5743576

Alias

I6938

Sex

Female

Center

HARVARD MEDICAL SCHO

Description

Roopkund_A

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway X2p

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
X2
chrM:1143G>A, chrM:13389A>G, chrM:13893T>C, chrM:15701C>T, chrM:5644T>C, chrM:5794C>T
X2p
chrM:15734T>C, chrM:6532C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 34613 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I6938.MT.bam	BAM	1.2 MB	—	—	c843f147081693b5a6b2e2486faee72a	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2072393 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I6938.1240K.bam	BAM	116.0 MB	—	—	4c9f1451dccdec92b17c054d6ebc28f7	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.