SAMEA5743572

EXTERNAL

Sample

Accession

SAMEA5743572

Alias

I6943

Sex

Male

Center

HARVARD MEDICAL SCHO

Description

Roopkund_A

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway M3a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M3
chrM:15549T>C, chrM:16475T>C
M3a
chrM:4003G>A
M3a1
chrM:4126T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 26707 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I6943.MT.bam	BAM	910.5 KB	—	—	660f2b4cb61f6082943d6dc914d8c1ab	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 659385 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I6943.1240K.bam	BAM	34.7 MB	—	—	7ab46a953a1cbd7601d669871f164003	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.