SAMEA5743568

EXTERNAL

Sample

Accession

SAMEA5743568

Alias

I2871

Sex

Female

Center

HARVARD MEDICAL SCHO

Description

Roopkund_A

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway M3c1a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M3c1a
chrM:10055T>C, chrM:13863A>G, chrM:14520T>C, chrM:15717C>T, chrM:8487G>A, chrM:9788G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 26501 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I2871.MT.bam	BAM	898.6 KB	—	—	0d5770249cfd2e4d35f2c1b2acc5adac	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2280003 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I2871.1240K.bam	BAM	122.9 MB	—	—	67023277b32b234bcc5862592ae44fcf	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.