SAMEA5743567

EXTERNAL

Sample

Accession

SAMEA5743567

Alias

I2872

Sex

Female

Center

HARVARD MEDICAL SCHO

Description

Roopkund_A

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway M3c2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M3
chrM:15549T>C, chrM:16475T>C
M3c
chrM:8487G>A
M3c2
chrM:15577T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 712818 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I2872.1240K.bam	BAM	39.5 MB	—	—	29cf0997ec8e10e89af4d6283fda0831	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 50006 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I2872.MT.bam	BAM	1.6 MB	—	—	2c8b07b3c969f4c2614c6a1c2eaf503a	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.