SAMEA5743566

EXTERNAL

Sample

Accession

SAMEA5743566

Alias

I2868

Sex

Male

Center

HARVARD MEDICAL SCHO

Description

Roopkund_A

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway M33d

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M33d
chrM:10392C>T, chrM:14373C>T, chrM:15711T>C, chrM:16196T>C, chrM:16199G>A, chrM:1785G>A, chrM:2539C>T, chrM:3447A>G, chrM:5986C>T, chrM:8091T>C, chrM:9389G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 4287846 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I2868.1240K.bam	BAM	219.4 MB	—	—	1867179d2646ca8175e1c67c5f9338cb	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 80100 · Read length: — · Date: 2019-08-20

File	Format	Size	Reference	Aligner	md5
I2868.MT.bam	BAM	2.5 MB	—	—	6bba8292057dbb2bc260642bb29a88ac	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.