SAMEA5607979

EXTERNAL

Sample

Accession

SAMEA5607979

Alias

I11488

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Shahr_I_Sokhta_BA2_LowCov

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway R

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 149219 · Read length: — · Date: 2019-09-05

File	Format	Size	Reference	Aligner	md5
I11488.bam	BAM	6.6 MB	—	—	c7e953711babd5b608756d219adde5da	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 149219 · Read length: — · Date: 2020-09-15

File	Format	Size	Reference	Aligner	md5
I11488.MT.bam	BAM	6.6 MB	—	—	c7e953711babd5b608756d219adde5da	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.