SAMEA5607977

EXTERNAL

Sample

Accession

SAMEA5607977

Alias

I8728

Sex

Male

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Shahr_I_Sokhta_BA2

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway R7

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R7
chrM:12528A>G, chrM:15742G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 5246120 · Read length: — · Date: 2019-09-05

File	Format	Size	Reference	Aligner	md5
I8728.bam	BAM	262.6 MB	—	—	298a1580092f03ccb54ab12a5927e415	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 5246120 · Read length: — · Date: 2020-09-15

File	Format	Size	Reference	Aligner	md5
I8728.MT.bam	BAM	262.6 MB	—	—	298a1580092f03ccb54ab12a5927e415	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.