SAMEA5607941

EXTERNAL

Sample

Accession

SAMEA5607941

Alias

I7722

Sex

Male

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Saidu_Sharif_H_o

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U2b2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U2
chrM:15474A>G
U2b
chrM:11529C>T, chrM:12617G>A, chrM:14472C>T, chrM:16138T>C, chrM:2130G>A, chrM:4609A>T
chrM:1312G>A [Node267]
chrM:1312G>A, chrM:15776C>T, chrM:16226A>G, chrM:8517C>T
U2b2
chrM:15662C>T, chrM:15775T>C, chrM:9037A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 15931053 · Read length: — · Date: 2019-09-05

File	Format	Size	Reference	Aligner	md5
I7722.bam	BAM	726.5 MB	—	—	b9a5f85a3ea349ee4baef6e254124c56	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 34729 · Read length: — · Date: 2020-09-15

File	Format	Size	Reference	Aligner	md5
I7722.MT.bam	BAM	1.1 MB	—	—	e47d9027b70d00d81ff2edbe8c33f9f4	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.