SAMEA5607938

EXTERNAL

Sample

Accession

SAMEA5607938

Alias

I6891

Sex

Male

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Saidu_Sharif_H

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway R5a2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R5
chrM:10177A>G, chrM:13967G>A, chrM:15947A>G, chrM:8017T>C
R5a
R5a2
chrM:10716A>G, chrM:13058T>C, chrM:13463G>A, chrM:14808C>T, chrM:15689C>T, chrM:15779T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 46370 · Read length: — · Date: 2020-09-15

File	Format	Size	Reference	Aligner	md5
I6891.MT.bam	BAM	1.5 MB	—	—	22853de15a356a1b3d3fd1749371ac6d	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 17855941 · Read length: — · Date: 2019-09-05

File	Format	Size	Reference	Aligner	md5
I6891.bam	BAM	840.2 MB	—	—	81270e312878f6184f4750d1d277bc59	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.