SAMEA5607604

EXTERNAL

Sample

Accession

SAMEA5607604

Alias

I6889

Sex

Male

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Barikot_H

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H2b

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H2
chrM:862G>A
H2b
chrM:15734T>C, chrM:8021T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 19021259 · Read length: — · Date: 2019-09-05

File	Format	Size	Reference	Aligner	md5
I6889.bam	BAM	924.6 MB	—	—	6807f3806c43cf5969df81033bca029a	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 63754 · Read length: — · Date: 2020-09-15

File	Format	Size	Reference	Aligner	md5
I6889.MT.bam	BAM	2.0 MB	—	—	9a03ec23dc37e956e72c4f5662de7b02	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.