SAMEA5607572

EXTERNAL

Sample

Accession

SAMEA5607572

Alias

I5273

Sex

Male

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

Afanasievo

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway T2a1a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R2'JT
JT
chrM:10674A>G, chrM:14875C>A, chrM:15549T>C, chrM:3639T>C
T
chrM:12791G>A, chrM:1312G>A, chrM:133G>A, chrM:14328G>A, chrM:15030A>G, chrM:15351G>A, chrM:15717C>T, chrM:4340A>G, chrM:8120G>A, chrM:9886T>C
T2
chrM:11235A>G, chrM:13656A>G
T2a1
chrM:13388T>C, chrM:14110A>G
T2a1a
chrM:2274T>C, chrM:6445T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 12223995 · Read length: — · Date: 2019-09-05

File	Format	Size	Reference	Aligner	md5
I5273.bam	BAM	656.7 MB	—	—	2fdb2296da8c0cef69753dea074e0456	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 79868 · Read length: — · Date: 2020-09-15

File	Format	Size	Reference	Aligner	md5
I5273.MT.bam	BAM	2.7 MB	—	—	30287f07410c98cfd4119550b4d1373e	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.