SAMEA5423867

EXTERNAL

Sample

Accession

SAMEA5423867

Alias

I8931

Sex

Female

Center

HARVARD MEDICAL SCHOOL

Description

Kenya_LSA

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway L0a2

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0a'b'f'g
chrM:11064A>G, chrM:14559C>T, chrM:14854G>A, chrM:15595T>C, chrM:15942C>T, chrM:16065A>G, chrM:16085A>G, chrM:16187C>T, chrM:1669A>G, chrM:4009T>C, chrM:5026C>T, chrM:9241C>T
L0a'b'g
chrM:15571C>T, chrM:15610T>C, chrM:16228T>C, chrM:7851C>T, chrM:7989A>G
L0a
chrM:10599G>A, chrM:13731T>C, chrM:15701T>C, chrM:15743C>T, chrM:4654G>A, chrM:4883G>A
L0a2
chrM:10595A>G, chrM:15942C>T, chrM:4570G>A, chrM:5134A>G, chrM:5680G>A, chrM:7883A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 340427 · Read length: — · Date: 2019-05-30

File	Format	Size	Reference	Aligner	md5
I8931.1240k.bam	BAM	16.6 MB	—	—	e16a46305c0fe0361d46d19777b2e36d	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 551 · Read length: — · Date: 2019-05-30

File	Format	Size	Reference	Aligner	md5
I8931.mt.bam	BAM	24.3 KB	—	—	25a865c3873f175cc49633c3c8b64f1b	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.