SAMEA5423861

EXTERNAL

Sample

Accession

SAMEA5423861

Alias

I8759

Sex

Male

Center

HARVARD MEDICAL SCHOOL

Description

Kenya_Pastoral_Neolithic_outlier

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway L3x1a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
L3e'i'k'x
chrM:10242A>G
L3x1a
chrM:13131G>A, chrM:14595G>A, chrM:15592C>T, chrM:15701C>T, chrM:16196T>C, chrM:2906G>A, chrM:4883G>A, chrM:5824A>G, chrM:7734T>C, chrM:8240A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 10930 · Read length: — · Date: 2019-05-30

File	Format	Size	Reference	Aligner	md5
I8759.mt.bam	BAM	382.2 KB	—	—	3c8c06d8a4c8ed0578b1c768b9268bd6	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 372360 · Read length: — · Date: 2019-05-30

File	Format	Size	Reference	Aligner	md5
I8759.1240k.bam	BAM	21.4 MB	—	—	1e8b9274311d995e1601fc77c9e67246	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.