SAMEA5423844

EXTERNAL

Sample

Accession

SAMEA5423844

Alias

I8814

Sex

Female

Center

HARVARD MEDICAL SCHOOL

Description

Kenya_Pastoral_Neolithic

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway L4b2a2

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L4b
chrM:15734T>C, chrM:15785T>C
L4b2
chrM:12893A>G, chrM:15716A>T, chrM:15778C>T, chrM:15822A>G, chrM:16138T>C, chrM:16236A>G, chrM:3341G>A, chrM:5683G>A, chrM:7527T>C, chrM:9278A>G
L4b2a2
chrM:10206A>C, chrM:1118T>C, chrM:4372A>G, chrM:837T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 14054873 · Read length: — · Date: 2019-05-30

File	Format	Size	Reference	Aligner	md5
I8814.1240k.bam	BAM	647.0 MB	—	—	827bfcd7dbc66fdee8cdad90697baf3a	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 20568 · Read length: — · Date: 2019-05-30

File	Format	Size	Reference	Aligner	md5
I8814.mt.bam	BAM	622.1 KB	—	—	b045713ab2a4fbf8ea71490e52e9e1f3	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.