SAMEA5277540

EXTERNAL

Sample

Accession

SAMEA5277540

Alias

CHA004

Sex

Female

Center

Max Planck Institute for the Science of Human History

Description

CHA004

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U4a2f

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U4'9
chrM:5422T>C
U4
chrM:10755C>T, chrM:14043C>T, chrM:15116T>C, chrM:15779T>C, chrM:16187T>C, chrM:4069T>C, chrM:5470A>G
U4a
chrM:8241C>T
U4a2f
chrM:11820A>G, chrM:1402A>G, chrM:14595G>A, chrM:15093T>C, chrM:16190C>T, chrM:2954G>A, chrM:3925T>C, chrM:613T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 186221 · Read length: — · Date: 2019-03-12

File	Format	Size	Reference	Aligner	md5
CHA004.A0102.bam	BAM	9.1 MB	—	—	64cc341fecbf96ff21c19695643981fd	Download

Instrument: Illumina HiSeq 4000 · Layout: SINGLE · Reads: 54016 · Read length: — · Date: 2019-03-12

File	Format	Size	Reference	Aligner	md5
CHA004.A0102.MT1.1.bam	BAM	1.6 MB	—	—	501898e52e4d525c9ff6267e6a19d465	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.