SAMEA5229544

EXTERNAL

Sample

Accession

SAMEA5229544

Alias

I12647

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

SE_Iberia_c.10-16CE

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H1ak1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H1
chrM:2434G>A
chrM:16065A>G
chrM:16065A>G
H1ak1
chrM:13250A>G, chrM:3089G>A, chrM:4816T>C, chrM:8781C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 4605132 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
I12647_1240k.bam	BAM	409.5 MB	—	—	a257c7c211813cccd62f98fb34274e6e	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 44734 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
S12647.E1.L1_MT.bam	BAM	3.5 MB	—	—	ea5dd362676f292f3b1150be4025f0b3	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.