SAMEA5229533

EXTERNAL

Sample

Accession

SAMEA5229533

Alias

I3807

Sex

Male

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

SE_Iberia_c.10-16CE

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U6a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U6a'b'd
chrM:15595T>C, chrM:15642A>G, chrM:2771A>G
U6a
chrM:13602A>G, chrM:15701C>T, chrM:7228G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1045276 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
I3807_1240k.bam	BAM	56.5 MB	—	—	f88009f69bcba9e71a6e886e021ec096	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 154532 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
S3807.E1.L1_MT.bam	BAM	4.8 MB	—	—	8a47a37df89e13c337f993178cc89eae	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 118265 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
S3807.E1.L2_MT.bam	BAM	3.8 MB	—	—	02fe4e1728611489f44db3f9cadc87ff	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 89736 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
S3807.E1.L3_MT.bam	BAM	3.1 MB	—	—	e060c821c0ab3e541d749bae705b3819	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.