SAMEA5229452

EXTERNAL

Sample

Accession

SAMEA5229452

Alias

I8213

Sex

Female

Center

HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS

Description

NE_Iberia_Greek

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway K2a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U8
chrM:9121T>C
U8b
chrM:13590C>T, chrM:2903A>G, chrM:8478G>A
K
chrM:10722T>C, chrM:14221T>C, chrM:15647T>C, chrM:15734T>C, chrM:9973A>G
K2
chrM:16138T>C, chrM:9139T>C
K2a
chrM:133G>A, chrM:3984T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 145626 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
I8213_1240k.bam	BAM	7.8 MB	—	—	cd4c7b8d6ddd29c158ae1af4d4d66f37	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 31695 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
S8213.E1.L1_MT.bam	BAM	1011.2 KB	—	—	0f98b4df5d39d2a0c10a3a0eeca5f241	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 13682 · Read length: — · Date: 2019-03-13

File	Format	Size	Reference	Aligner	md5
S8213.E1.L2_MT.bam	BAM	440.2 KB	—	—	a15152a7ac05be9176e0c6751391eb80	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.