SAMEA5229428
EXTERNALSample
- Accession
SAMEA5229428- Alias
- I3757
- Sex
- Female
- Center
- HARVARD MEDICAL SCHOOL, DEPARTMENT OF GENETICS
- Description
- N_Iberia_IA
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
J1c1
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
-
NchrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
-
RchrM:15646T>C
-
JTchrM:10674A>G, chrM:14875C>A, chrM:15549T>C, chrM:3639T>C
-
JchrM:12035A>G, chrM:13131G>A, chrM:15492C>T, chrM:15942C>T, chrM:16287C>T, chrM:16482T>C, chrM:9821A>G
-
J1chrM:16455C>T, chrM:2434G>A
-
J1cchrM:14221T>C
-
J1c1chrM:16475T>C, chrM:2817T>C
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 1367708 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| I3757_1240k.bam | BAM | 64.8 MB | — | — | 29b2d7c8e3142bd54401999bf21f8de1 | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 67688 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L2_MT.bam | BAM | 2.0 MB | — | — | ec90ce5c95123faf00c01bc49358977e | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 4729 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L4_MT.bam | BAM | 155.5 KB | — | — | 7dd5d4c5f9e172e95ecb123c34ad2c16 | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 19325 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L5_MT.bam | BAM | 595.9 KB | — | — | dc4edec2a44d62d183de66d7c6436caf | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 30990 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L6_MT.bam | BAM | 933.8 KB | — | — | e294c766882a156eb692a7094ea1feb9 | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 74336 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L1_MT.bam | BAM | 2.2 MB | — | — | bf1df846b9017e79c42ec0bf6e05b135 | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 99520 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L3_MT.bam | BAM | 3.1 MB | — | — | 6c714ae738e85d7b130f2f927f13f9ca | Download |
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 21802 ·
Read length: — ·
Date: 2019-03-13
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S3757.E1.L7_MT.bam | BAM | 655.0 KB | — | — | baf2e340103db7c7487642db3d16ab75 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.