SAMEA4778664

EXTERNAL

Sample

Accession

SAMEA4778664

Alias

chy001

Sex

Female

Center

STOCKHOLM UNIVERSITY

Description

Ancient Human Genome

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H2a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H2
chrM:862G>A
H2a
chrM:4192G>A
H2a1
chrM:15777C>T, chrM:375G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: HiSeq X Ten · Layout: SINGLE · Reads: 21401377 · Read length: — · Date: 2018-10-02

File	Format	Size	Reference	Aligner	md5
chy001_CGGCGTA_merged.160927.hs37d5.fa.cons.90perc.bam	BAM	1.3 GB	—	—	e182693fb395bc6d38fa7a4fc7b48c73	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.