SAMEA4461550

EXTERNAL

Sample

Accession

SAMEA4461550

Alias

JK2911

Sex

Male

Center

UNIVERSITY OF TUEBINGEN

Description

Mitochondrial and nuclear captures of human specimen.

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway M1a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M1a1
chrM:11769C>T, chrM:11826C>T, chrM:13533T>C, chrM:15672T>C, chrM:15782T>C, chrM:16187T>C, chrM:237A>G, chrM:3128G>A, chrM:5869G>A, chrM:6094T>C, chrM:6103T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 982165 · Read length: — · Date: 2017-05-29

File	Format	Size	Reference	Aligner	md5
JK2911_S46_L001_R1_001.fastq.merged.fq.MT_realigned.qF.sorted_rmdup.bam	BAM	42.9 MB	—	—	d2071513fd2b6877644ca6b5ce645d22	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.