SAMEA3663971

EXTERNAL

Sample

Accession

SAMEA3663971

Alias

I1541

Sex

Male

Center

HARVARD MEDICAL SCHOOL

Description

Central_LNBA_1d_rel_I1538+I1540

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U2e1a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U2'3'4'7'8'9
chrM:1235A>G
U2
chrM:15474A>G
U2e1
chrM:10299A>G, chrM:12443T>C, chrM:13157T>C, chrM:15330A>G, chrM:15552G>C, chrM:15785T>C, chrM:16209T>C, chrM:16501A>G, chrM:3143A>G, chrM:4813A>G, chrM:4849T>C, chrM:5468C>T, chrM:5575T>C
chrM:16333C>T
chrM:16333C>T
U2e1a1
chrM:10620C>T, chrM:11155T>C, chrM:2539C>T

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 1079899 · Read length: — · Date: 2015-11-25

File	Format	Size	Reference	Aligner	md5
I1541.1240k.bam	BAM	62.6 MB	—	—	639229b05ee446e5ebb40997b1ccaf2d	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 127167 · Read length: — · Date: 2015-11-25

File	Format	Size	Reference	Aligner	md5
I1541.MT.bam	BAM	6.5 MB	—	—	7d2c88b975e2e76748199ef6ca34c588	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.