SAMEA3449877

EXTERNAL

Sample

Accession

SAMEA3449877

Alias

HGDP00058

Sex

Male

Center

Description

simons_data_sample_305

Source publications

Y-DNA pathway L1c

Called haplogroup is not yet placed in the tree.

mtDNA pathway M3a1b

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M3
chrM:15549T>C, chrM:16475T>C
M3a
chrM:4003G>A
M3a1
chrM:4126T>C
M3a1-T204C
chrM:16196T>C
M3a1b
chrM:10268C>T, chrM:15734T>C, chrM:16209T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 649663158 · Read length: — · Date: 2015-09-18

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_C01.bam	BAM	106.2 GB	—	—	fa3c097537c343d881de9d3df7561c66	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.