SAMEA3302894

EXTERNAL

Sample

Accession

SAMEA3302894

Alias

HGDP01036

Sex

Male

Center

Description

simons_data_sample_120

Source publications

Y-DNA pathway A1b1b2a

Called haplogroup is not yet placed in the tree.

mtDNA pathway L0d1c

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0d1'2
chrM:11544T>C, chrM:14889G>A, chrM:15353G>A, chrM:15364T>C, chrM:15666T>C, chrM:15701T>C, chrM:16138T>C, chrM:16181G>A, chrM:16255G>A, chrM:3179A>G, chrM:3655T>C, chrM:6238T>C, chrM:7536C>A, chrM:7575G>A, chrM:7674G>A, chrM:862G>A
L0d1
chrM:13182G>A, chrM:143G>A, chrM:2130G>A, chrM:2861G>A, chrM:5689A>G
L0d1c
chrM:10860T>C, chrM:11658T>C, chrM:15374A>G, chrM:15657C>T, chrM:16449C>T, chrM:3620C>T, chrM:8573A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 641100646 · Read length: — · Date: 2016-05-03

File	Format	Size	Reference	Aligner	md5
ERR1395596_1.fastq.gz	FASTQ	53.2 GB	—	—	9508e6a7eae68340620bd7fac75f0f0b	Download
ERR1395596_2.fastq.gz	FASTQ	53.6 GB	—	—	677a6e4de283351ecd9cfacc65958348	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.