SAMEA3302890

EXTERNAL

Sample

Accession

SAMEA3302890

Alias

HGDP00090

Sex

Male

Center

Description

simons_data_sample_224

Source publications

Y-DNA pathway E1b1b1a1c

Called haplogroup is not yet placed in the tree.

mtDNA pathway chrM:7581A>G

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M5
chrM:15552G>A
M5a'd
chrM:13746G>A, chrM:3344C>T
M5a
M5a2
chrM:3877T>C
M5a2a
chrM:14685T>C
chrM:7581A>G
chrM:7581A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 644255561 · Read length: — · Date: 2015-09-18

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_D01.bam	BAM	105.0 GB	—	—	723e4b46536003a337318c0b20c3c57b	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.