SAMEA3302877

EXTERNAL

Sample

Accession

SAMEA3302877

Alias

HGDP00775

Sex

Male

Center

Description

simons_data_sample_73

Source publications

Y-DNA pathway O2a

Called haplogroup is not yet placed in the tree.

mtDNA pathway chrM:9524T>C

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R9
chrM:13351G>C, chrM:3393C>T
R9b1
chrM:12137T>C, chrM:15732A>G, chrM:15813G>A, chrM:965T>C
R9b1a
R9b1a3
chrM:2627C>T, chrM:2739G>A, chrM:6238T>C
chrM:9524T>C
chrM:9524T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 598758399 · Read length: — · Date: 2016-05-03

File	Format	Size	Reference	Aligner	md5
ERR1395592_1.fastq.gz	FASTQ	49.4 GB	—	—	41d32d4881afe42a18e7dd58598dd1d6	Download
ERR1395592_2.fastq.gz	FASTQ	50.7 GB	—	—	cab1f4c83f8e9b70a8b3de3298ea7298	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.