SAMEA3302854

EXTERNAL

Sample

Accession

SAMEA3302854

Alias

NA19044

Sex

Male

Center

Description

simons_data_sample_106

Source publications

Y-DNA pathway E1b1a1a1f1a1d

Called haplogroup is not yet placed in the tree.

mtDNA pathway L3b1a1a

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
chrM:12528A>G
chrM:12528A>G, chrM:15547T>C
L3b1a
chrM:10425A>G, chrM:13337C>A, chrM:15247A>G, chrM:15701C>T, chrM:2873C>T, chrM:5196G>A, chrM:5644T>C, chrM:8872C>T, chrM:9509A>G, chrM:9796G>A
L3b1a1
chrM:11223A>G, chrM:15547T>C
L3b1a1a
chrM:15306G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 544105336 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347655_1.fastq.gz	FASTQ	47.2 GB	—	—	24a2c12e7ce86f4fb67fc2584a61499d	Download
ERR1347655_2.fastq.gz	FASTQ	45.7 GB	—	—	3ac1c6ba5b13c1f671bd73bec5663c2f	Download

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 544105336 · Read length: — · Date: 2016-09-13

File	Format	Size	Reference	Aligner	md5
ERR1625858_1.fastq.gz	FASTQ	47.2 GB	—	—	0846fcdc5d7ead7e4c905ea1055cc868	Download
ERR1625858_2.fastq.gz	FASTQ	45.7 GB	—	—	86fffa098aa8056d6bec8c3477884e0e	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.