SAMEA3302849

EXTERNAL

Sample

Accession

SAMEA3302849

Alias

HGDP01034

Sex

Male

Center

Description

simons_data_sample_215

Source publications

Y-DNA pathway E1b1a1a1f1a1

Called haplogroup is not yet placed in the tree.

mtDNA pathway L0d1b2

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0d1'2
chrM:11544T>C, chrM:14889G>A, chrM:15353G>A, chrM:15364T>C, chrM:15666T>C, chrM:15701T>C, chrM:16138T>C, chrM:16181G>A, chrM:16255G>A, chrM:3179A>G, chrM:3655T>C, chrM:6238T>C, chrM:7536C>A, chrM:7575G>A, chrM:7674G>A, chrM:862G>A
L0d1
chrM:13182G>A, chrM:143G>A, chrM:2130G>A, chrM:2861G>A, chrM:5689A>G
L0d1b2
chrM:13738C>T, chrM:14082C>T, chrM:15552G>A, chrM:15717C>T, chrM:3041T>C, chrM:6706T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 597939136 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347723_1.fastq.gz	FASTQ	46.2 GB	—	—	0457d99ac86565548b0ee7a7b10bc1e9	Download
ERR1347723_2.fastq.gz	FASTQ	46.2 GB	—	—	b939d8f7ac43b03d4abc1f2bebc9c769	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.