SAMEA3302836

EXTERNAL

Sample

Accession

SAMEA3302836

Alias

HGDP01274

Sex

Female

Center

Description

simons_data_sample_165

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway U6a1a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
U
chrM:10890A>G, chrM:11731A>G, chrM:11795G>A
U6a'b'd
chrM:15595T>C, chrM:15642A>G, chrM:2771A>G
U6a
chrM:13602A>G, chrM:15701C>T, chrM:7228G>A
U6a1a1
chrM:13058T>C, chrM:13682G>A, chrM:14350A>G, chrM:15662C>T, chrM:15785T>C, chrM:16174T>C, chrM:3392C>T, chrM:3595T>A, chrM:8723G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 605625101 · Read length: — · Date: 2015-09-24

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_H08.bam	BAM	92.7 GB	—	—	b23b2dccb275d4f84be15b0e1d25e8ca	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.