SAMEA3302833

EXTERNAL

Sample

Accession

SAMEA3302833

Alias

HGDP00982

Sex

Male

Center

Description

simons_data_sample_118

Source publications

Y-DNA pathway E2b1a

Called haplogroup is not yet placed in the tree.

mtDNA pathway L0a2b

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0a'b'f'g
chrM:11064A>G, chrM:14559C>T, chrM:14854G>A, chrM:15595T>C, chrM:15942C>T, chrM:16065A>G, chrM:16085A>G, chrM:16187C>T, chrM:1669A>G, chrM:4009T>C, chrM:5026C>T, chrM:9241C>T
L0a'b'g
chrM:15571C>T, chrM:15610T>C, chrM:16228T>C, chrM:7851C>T, chrM:7989A>G
L0a
chrM:10599G>A, chrM:13731T>C, chrM:15701T>C, chrM:15743C>T, chrM:4654G>A, chrM:4883G>A
L0a2
chrM:10595A>G, chrM:15942C>T, chrM:4570G>A, chrM:5134A>G, chrM:5680G>A, chrM:7883A>G
L0a2b
chrM:10692C>T, chrM:11595A>G, chrM:12704T>C, chrM:15665C>T, chrM:15813G>A, chrM:16181G>A, chrM:2795T>C, chrM:4660G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 622409734 · Read length: — · Date: 2016-05-03

File	Format	Size	Reference	Aligner	md5
ERR1395594_1.fastq.gz	FASTQ	52.3 GB	—	—	2483b95c3a9645d09197cbb7ef1eea92	Download
ERR1395594_2.fastq.gz	FASTQ	53.0 GB	—	—	9573fe67548c0ea105fac61552ad36b5	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.