SAMEA3302827

EXTERNAL

Sample

Accession

SAMEA3302827

Alias

HGDP01314

Sex

Female

Center

Description

simons_data_sample_186

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway F1g

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R9
chrM:13351G>C, chrM:3393C>T
F
chrM:5815T>C, chrM:9733G>A
F1
chrM:10032T>C, chrM:11829G>A, chrM:6385G>A
F1g
chrM:1813C>T, chrM:2821T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 755410343 · Read length: — · Date: 2016-05-03

File	Format	Size	Reference	Aligner	md5
ERR1395573_1.fastq.gz	FASTQ	62.3 GB	—	—	83f994e9e602a0943a5704302b82f7df	Download
ERR1395573_2.fastq.gz	FASTQ	62.6 GB	—	—	ad4d8fbc8311056cfa7ebcb48eb58096	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.