SAMEA3302823

EXTERNAL

Sample

Accession

SAMEA3302823

Alias

HGDP00616

Sex

Male

Center

Description

simons_data_sample_259

Source publications

Y-DNA pathway J1b2b

Called haplogroup is not yet placed in the tree.

mtDNA pathway R0a2

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
R0a-60.1T
chrM:12611C>T, chrM:14189C>T, chrM:15549T>C, chrM:15785T>C, chrM:1866T>C, chrM:3270T>C
R0a2
chrM:15097T>C, chrM:1779A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 670182661 · Read length: — · Date: 2015-09-24

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_E02.bam	BAM	99.0 GB	—	—	0e676567c80ebc67b08055aea6e45f1f	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.