SAMEA3302818

EXTERNAL

Sample

Accession

SAMEA3302818

Alias

HGDP01297

Sex

Male

Center

Description

simons_data_sample_242

Source publications

Y-DNA pathway R1a1a1b2a1a1

Called haplogroup is not yet placed in the tree.

mtDNA pathway chrM:12558G>A [Node817]

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
M4''67
chrM:11430G>A
chrM:12558G>A [Node817]
chrM:12558G>A, chrM:15741A>T, chrM:16085A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 766030315 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347688_1.fastq.gz	FASTQ	64.3 GB	—	—	d4dbe12a6a9e116b8d890603a1810758	Download
ERR1347688_2.fastq.gz	FASTQ	64.0 GB	—	—	f1f58817e6d365498d106509473eb29a	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.