SAMEA3302802

EXTERNAL

Sample

Accession

SAMEA3302802

Alias

HGDP00951

Sex

Male

Center

Description

simons_data_sample_247

Source publications

Y-DNA pathway N1c1a1

Called haplogroup is not yet placed in the tree.

mtDNA pathway F2b1

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
R9
chrM:13351G>C, chrM:3393C>T
F
chrM:5815T>C, chrM:9733G>A
chrM:15942C>T [Node2663]
chrM:15942C>T
F2
chrM:10009G>A, chrM:11761T>C, chrM:1248T>C, chrM:13131G>A, chrM:429T>C, chrM:7251A>G, chrM:9958T>C
F2-C16291T
F2b1
chrM:15515T>A, chrM:4234A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 723289094 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347705_1.fastq.gz	FASTQ	59.5 GB	—	—	5eaa00bc25b6d60354a76def7f4a532a	Download
ERR1347705_2.fastq.gz	FASTQ	59.5 GB	—	—	f08fcf627dbda012fc8233577971fd3c	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.