SAMEA3302771

EXTERNAL

Sample

Accession

SAMEA3302771

Alias

HGDP00160

Sex

Male

Center

Description

simons_data_sample_206

Source publications

Y-DNA pathway J2a1h2

Called haplogroup is not yet placed in the tree.

mtDNA pathway chrM:15732A>G [Node1380]

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L2
chrM:12194G>A, chrM:13013G>A, chrM:15813G>A, chrM:16138T>C, chrM:16187T>C, chrM:1840T>C, chrM:7629G>A, chrM:8644A>G, chrM:9538T>C
L2a'b'c'd
chrM:11367T>C
L2a
chrM:6598T>C
L2a1'2'3'4
chrM:11337G>A, chrM:13226A>G, chrM:13989A>G, chrM:15717C>T, chrM:6697C>T, chrM:7194A>G
L2a1
chrM:15207T>C, chrM:16174T>C
L2a1a
chrM:14667A>G, chrM:15052T>C, chrM:4708A>G
L2a1a2
chrM:15732A>G [Node1380]
chrM:15732A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 648213378 · Read length: — · Date: 2015-09-18

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_C07.bam	BAM	99.0 GB	—	—	fe3c948c2e2cdc1c80f72e48561e8bcf	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.