SAMEA3302732

EXTERNAL

Sample

Accession

SAMEA3302732

Alias

NA17377

Sex

Male

Center

Description

simons_data_sample_102

Source publications

Y-DNA pathway E1b1b1a1b

Called haplogroup is not yet placed in the tree.

mtDNA pathway H11a

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H-T195C!
chrM:16187T>C
H11a
chrM:13182G>A, chrM:15716A>G, chrM:15734T>C, chrM:385T>G, chrM:7871T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 568717353 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347668_1.fastq.gz	FASTQ	48.0 GB	—	—	a14e5fbffd30ee4a4bc107da6337cdae	Download
ERR1347668_2.fastq.gz	FASTQ	47.4 GB	—	—	43fb73e1d10d24d76393b8de87533d7b	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.