SAMEA3302682

EXTERNAL

Sample

Accession

SAMEA3302682

Alias

HGDP01032

Sex

Male

Center

Description

simons_data_sample_198

Source publications

Y-DNA pathway B2b1b

Called haplogroup is not yet placed in the tree.

mtDNA pathway L0d1b2a1

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0d1'2
chrM:11544T>C, chrM:14889G>A, chrM:15353G>A, chrM:15364T>C, chrM:15666T>C, chrM:15701T>C, chrM:16138T>C, chrM:16181G>A, chrM:16255G>A, chrM:3179A>G, chrM:3655T>C, chrM:6238T>C, chrM:7536C>A, chrM:7575G>A, chrM:7674G>A, chrM:862G>A
L0d1
chrM:13182G>A, chrM:143G>A, chrM:2130G>A, chrM:2861G>A, chrM:5689A>G
L0d1b2
chrM:13738C>T, chrM:14082C>T, chrM:15552G>A, chrM:15717C>T, chrM:3041T>C, chrM:6706T>C
L0d1b2a1
chrM:13703A>G, chrM:13983G>A, chrM:14872T>C, chrM:15576G>A, chrM:15897G>T, chrM:16199G>A, chrM:6115A>G, chrM:8213G>A, chrM:8460A>G, chrM:9310T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 581159794 · Read length: — · Date: 2015-09-18

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_A11.bam	BAM	97.8 GB	—	—	4c7a3edc47635a574f7d7aa6599f86b2	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.