SAMEA3302673

EXTERNAL

Sample

Accession

SAMEA3302673

Alias

HGDP00461

Sex

Male

Center

Description

simons_data_sample_279

Source publications

Y-DNA pathway B2b1a1b

Called haplogroup is not yet placed in the tree.

mtDNA pathway L1c2'4

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L1
chrM:13212T>C, chrM:13601T>C, chrM:13983G>A, chrM:15716A>G, chrM:16181A>G, chrM:3089G>A, chrM:6478A>G, chrM:6812T>C
L1c
chrM:10009G>A, chrM:12908A>G, chrM:13423T>A, chrM:14334C>T, chrM:15552G>A, chrM:15717C>T, chrM:15783C>T, chrM:16143C>T, chrM:16178C>A, chrM:16181G>C, chrM:16309G>A, chrM:5374A>G, chrM:5494T>C, chrM:7450G>A, chrM:8495A>G
L1c1'2'4'6
chrM:16190C>T, chrM:16289A>G, chrM:9744T>C
L1c2'4
chrM:11472C>T, chrM:15716A>G

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 654922332 · Read length: — · Date: 2015-09-24

File	Format	Size	Reference	Aligner	md5
LP6005441-DNA_H02.bam	BAM	96.5 GB	—	—	1c3019499048ac10139b7c4ecd4416c4	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.