SAMEA3302666

EXTERNAL

Sample

Accession

SAMEA3302666

Alias

HGDP01308

Sex

Male

Center

Description

simons_data_sample_76

Source publications

Y-DNA pathway C3

Called haplogroup is not yet placed in the tree.

mtDNA pathway chrM:9279T>C

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
M
chrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
D
chrM:15785T>C, chrM:4306C>T, chrM:4601C>A
D4
chrM:14091C>T, chrM:2434G>A, chrM:7837C>T
D4-T195C!
chrM:9279T>C
chrM:15739A>G, chrM:9279T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 619655380 · Read length: — · Date: 2016-05-03

File	Format	Size	Reference	Aligner	md5
ERR1395618_1.fastq.gz	FASTQ	51.4 GB	—	—	e8a3af95c75acd0fddb79fd0d7fb3c0c	Download
ERR1395618_2.fastq.gz	FASTQ	52.7 GB	—	—	40ec5bd1ac25f8fc788e26f38886d514	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.