SAMEA3302630

EXTERNAL

Sample

Accession

SAMEA3302630

Alias

HGDP01030

Sex

Male

Center

Description

simons_data_sample_240

Source publications

Y-DNA pathway E1b1a1a1f

Called haplogroup is not yet placed in the tree.

mtDNA pathway L0d1'2

From de-novo tree placement

mt-MRCA
L0
chrM:10012G>A, chrM:10087C>T, chrM:10338T>C, chrM:11337G>A, chrM:11430G>A, chrM:12699A>G, chrM:15653A>G, chrM:16174T>C, chrM:2939C>A, chrM:3735C>T, chrM:472C>T, chrM:4865T>C, chrM:5608T>C, chrM:8465C>T, chrM:8770A>G, chrM:9178G>A
L0d1'2
chrM:11544T>C, chrM:14889G>A, chrM:15353G>A, chrM:15364T>C, chrM:15666T>C, chrM:15701T>C, chrM:16138T>C, chrM:16181G>A, chrM:16255G>A, chrM:3179A>G, chrM:3655T>C, chrM:6238T>C, chrM:7536C>A, chrM:7575G>A, chrM:7674G>A, chrM:862G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 664503313 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347732_1.fastq.gz	FASTQ	51.9 GB	—	—	abe0f54cf170cd84d378a37fe396efbb	Download
ERR1347732_2.fastq.gz	FASTQ	52.0 GB	—	—	5d7dec4dee8b6faa23720780e19f0053	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.