SAMEA3302623

EXTERNAL

Sample

Accession

SAMEA3302623

Alias

NA13616

Sex

Male

Center

Description

simons_data_sample_121

Source publications

Y-DNA pathway O3a2b1

Called haplogroup is not yet placed in the tree.

mtDNA pathway B4a1a

From de-novo tree placement

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
B4
chrM:15640T>C
B4-C16261T
chrM:15684C>T
B4a
chrM:4888T>C, chrM:8546G>A
B4a1
chrM:9661T>C
B4a1a
chrM:11662C>T, chrM:15169A>G, chrM:16138T>C, chrM:6142T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2000 · Layout: PAIRED · Reads: 704817768 · Read length: — · Date: 2016-04-05

File	Format	Size	Reference	Aligner	md5
ERR1347735_1.fastq.gz	FASTQ	60.6 GB	—	—	33877c436b9cda4f34b5e78a3f5d47f4	Download
ERR1347735_2.fastq.gz	FASTQ	60.4 GB	—	—	a89cb69d74b259c76fd48156ae369373	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.