SAMEA3270114

EXTERNAL

Sample

Accession

SAMEA3270114

Alias

I0116

Sex

Male

Center

Reich Lab

Description

Unetice_EBA

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway W3a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
W
chrM:11097C>T, chrM:11837T>C, chrM:133G>A, chrM:15307G>C, chrM:15715C>T, chrM:16181A>G, chrM:16196T>C, chrM:16199G>A, chrM:2928A>G, chrM:4469G>A, chrM:4883G>A, chrM:667T>C, chrM:7674G>A, chrM:8417G>A
W-C194T
chrM:16186C>T
W3a1
chrM:12686A>G, chrM:15207T>C, chrM:830T>C

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: Illumina HiSeq 2500 · Layout: SINGLE · Reads: 74324 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
S0116__aln.sort.mapped.rmdupse_adna_v2.bam	BAM	5.2 MB	—	—	dbdded42f0a85c4bd98059e6c66cdc07	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 4307475 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
I0116.390k.bam	BAM	338.7 MB	—	—	699f37895220ebcef6ef8e5bf6182f0c	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.