SAMEA3270100
EXTERNALSample
- Accession
SAMEA3270100- Alias
- I0104
- Sex
- Male
- Center
- Reich Lab
- Description
- Corded_Ware_LN
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
U4b1a1a1
-
L1'2'3'4'5'6'7chrM:16181G>A
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L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
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L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
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L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
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NchrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
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RchrM:15646T>C
-
UchrM:10890A>G, chrM:11731A>G, chrM:11795G>A
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U2'3'4'7'8'9chrM:1235A>G
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U4'9chrM:5422T>C
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U4chrM:10755C>T, chrM:14043C>T, chrM:15116T>C, chrM:15779T>C, chrM:16187T>C, chrM:4069T>C, chrM:5470A>G
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U4bchrM:7128T>C
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U4b1chrM:10762T>C
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U4b1achrM:3095A>G
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U4b1a1a1chrM:11720T>C, chrM:1507T>C, chrM:15212C>T, chrM:15785T>C, chrM:8065A>G
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 5844221 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| I0104.390k.bam | BAM | 422.0 MB | — | — | ac71b07491de66a9333f56ef18425160 | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 92561 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0104__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 4.3 MB | — | — | 441f1a602bd720bdcd119247be33cccf | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 43625 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0402__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 1.9 MB | — | — | dd73b61a1035e3d5b8783fc808f8a319 | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 75168 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0401__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 3.0 MB | — | — | 105887997206ac0f85aa7583e354b5f7 | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.