SAMEA3270090

EXTERNAL

Sample

Accession

SAMEA3270090

Alias

I0370

Sex

Male

Center

Reich Lab

Description

Yamnaya

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway H13a1a1

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
H
chrM:2130G>A, chrM:6451T>C
H13a
chrM:14295C>T, chrM:1683C>T
H13a1
chrM:4168A>G
H13a1a
chrM:13103C>T, chrM:15942C>T
H13a1a1
chrM:12749T>C, chrM:6760G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 132 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
S0370_E2_L1__aln.sort.mapped.rmdupse_adna_v2.bam	BAM	6.7 KB	—	—	0f4e7fa80085f3c895965e67d9382392	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 682277 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
I0370.390k.bam	BAM	45.6 MB	—	—	adf20f4d11dc48972c2888542602fc4b	Download

Instrument: Illumina MiSeq · Layout: SINGLE · Reads: 78982 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
S0370_E1_L1__aln.sort.mapped.rmdupse_adna_v2.bam	BAM	2.6 MB	—	—	4f48d2d2713c5c836d5b0e79d1f14112	Download

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 129 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
S0370_E2_L2__aln.sort.mapped.rmdupse_adna_v2.bam	BAM	6.8 KB	—	—	040e9ba96d8973132492759a874912d5	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.