SAMEA3270079

EXTERNAL

Sample

Accession

SAMEA3270079

Alias

I0413

Sex

Female

Center

Reich Lab

Description

Spain_EN

Source publications

Y-DNA pathway

No haplogroup call for this sample.

mtDNA pathway V

mt-MRCA
L1'2'3'4'5'6'7
chrM:16181G>A
L2'3'4'5'6'7
chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
L2'3'4'6
chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
L3'4
chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
L3
chrM:193A>G, chrM:442A>G
N
chrM:10296C>T, chrM:14724A>G, chrM:8124G>A, chrM:8963C>T
R
chrM:15646T>C
HV
chrM:11142A>G, chrM:14189T>C
HV0
chrM:15721T>C, chrM:16064T>C
V
chrM:15327C>T, chrM:4003G>A

Origin

Sequencing & coverage

No sequencing data available.

Sequence data & files

Instrument: NextSeq 500 · Layout: SINGLE · Reads: 2815632 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
I0413.390k.bam	BAM	168.1 MB	—	—	e3d5d8077cae1bcf93c8ab166b68cdfb	Download

Instrument: Illumina MiSeq · Layout: SINGLE · Reads: 83944 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
S0413__aln.sort.mapped.rmdupse_adna_v2.bam	BAM	3.9 MB	—	—	baaa9a147f198a5e58437d0103298df6	Download

Instrument: Illumina MiSeq · Layout: SINGLE · Reads: 148121 · Read length: — · Date: 2015-03-01

File	Format	Size	Reference	Aligner	md5
S0494__aln.sort.mapped.rmdupse_adna_v2.bam	BAM	5.2 MB	—	—	6722645e1a49f0379704969c4eb9387e	Download

Ancestry

No ancestry breakdown available.

Predicted phenotype and genetic-distance metrics are not yet available.