SAMEA3270053
EXTERNALSample
- Accession
SAMEA3270053- Alias
- I0061
- Sex
- Male
- Center
- Reich Lab
- Description
- Karelia_HG
- Source publications
Y-DNA pathway
No haplogroup call for this sample.
mtDNA pathway
C1
-
L1'2'3'4'5'6'7chrM:16181G>A
-
L2'3'4'5'6'7chrM:12528G>A, chrM:15734C>T, chrM:16187C>T, chrM:2182A>G, chrM:2309C>T, chrM:6569G>A, chrM:7891T>C
-
L2'3'4'6chrM:10111A>G, chrM:10233C>T, chrM:12929T>C, chrM:14724G>A, chrM:15610T>C, chrM:249A>T, chrM:8078T>C
-
L3'4chrM:13073T>C, chrM:15701T>C, chrM:16174T>C, chrM:3017T>C, chrM:3527G>A, chrM:6679T>C, chrM:6944A>G
-
L3chrM:193A>G, chrM:442A>G
-
MchrM:14206T>C, chrM:14466G>A, chrM:16482T>C, chrM:9823C>T
-
CZchrM:14910A>T, chrM:15721T>C, chrM:4138A>G, chrM:6619C>A, chrM:8007G>A
-
C1chrM:11337G>A, chrM:12686A>G, chrM:13741T>C, chrM:15748T>C, chrM:2975T>A, chrM:8968A>G
Origin
Sequencing & coverage
No sequencing data available.
Sequence data & files
Instrument: NextSeq 500 ·
Layout: SINGLE ·
Reads: 6402975 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| I0061.390k.bam | BAM | 387.1 MB | — | — | 001547cb2661497f477521ef117cc524 | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 6061 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0061__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 293.1 KB | — | — | b59681d8fb5f15c116b5a59be6ff82c9 | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 38651 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0392__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 1.5 MB | — | — | a9dc9a0d56b66b14d97c7237145422af | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 99515 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0230__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 3.1 MB | — | — | 1bb3ec1f9fd6a86c8cf64f38794a1b55 | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 33520 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0393__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 1.2 MB | — | — | 2e975d5c5140edf830583b6e17534c12 | Download |
Instrument: Illumina MiSeq ·
Layout: SINGLE ·
Reads: 188577 ·
Read length: — ·
Date: 2015-03-01
| File | Format | Size | Reference | Aligner | md5 | |
|---|---|---|---|---|---|---|
| S0670__aln.sort.mapped.rmdupse_adna_v2.bam | BAM | 5.8 MB | — | — | e49b7919e6243e8f841e7159724a5afa | Download |
Ancestry
No ancestry breakdown available.
Predicted phenotype and genetic-distance metrics are not yet available.